Sequence analysis

1. Search of transcription factors binding sites

 Molecular modelling

1. Secondary and tertiary protein structures
2. Antibody and immunocojugates in-silico design
3. Design of sequence and structures of small peptides for specific user’s requirements
4. Thermodynamic properties of complex molecules (for nanotechnology or biotechnology applications)

 Metabolic engineering

1. Quantitative reproduction of metabolic pathways using ODE methods
2. Metabolic fluxes optimization via Palsson’s method (A. Varma, B. Palsson, Nature Biotech. 12 (1994)  994)

M. E. Frazier et al., Science 300 (2003) 290